PhD Candidate
Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
PhD Bioinformatics
2023-09-01
2027-06-30
Huazhong Agricultural University
MS Biology
2018-09-01
2021-06-30
Fujian Agricultural and Forestry University
BS Bioengineering
2013-09-01
2017-06-30
Fujian Agricultural and Forestry University
C-Phasing is a chromosome-scale assembly framework for haplotype-resolved reconstruction of polyploid genomes using Hi-C and Pore-C data.
It integrates graph algorithms, long-read sequencing, chromatin interaction data, and methylation information to improve chromosome reconstruction in complex genomes.
Selected research software and methods.
A chromosome-scale assembly framework for haplotype-resolved reconstruction of polyploid genomes using Hi-C and Pore-C data.
Jungang Wang#, Xiaofeng Li#, Yibin Wang#, Jishan Lin#, Shuai Chen#, Hongbo Liu#, Xiao Chen#, ..., Muqing Zhang*, Ray Ming*, Xingtan Zhang* (2026). Genetic Architecture of Sugarcane Traits in a Polyploid Genomics Framework . Nature.
# Equal contribution; * Corresponding authors.
Bilig Sod, Xueqian Jiang, Fei He, Yibin Wang, ..., Xingtan Zhang*, Ruicai Long* (2026). The Haplotype-Resolved and near-Telomere-to-Telomere Genome Assembly for the Autotetraploid Alfalfa . Plant Communications.
* Corresponding authors.
Fang Wang, Yibin Wang, Xiaofei Zeng, ..., Xingtan Zhang* (2024). MIKE: An Ultrafast, Assembly-, and Alignment-Free Approach for Phylogenetic Tree Construction . Bioinformatics.
* Corresponding authors.